Gene detail information of Glyur001455s00037991.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G22070.13.00E-81TGA1A-related gene 3
NRXP_007141120.11.02E-160hypothetical protein PHAVU_008G169000g [Phaseolus vulgaris]
Swissprottr|Q39234|TGA3_ARATH8.00E-99Transcription factor TGA3
trEMBLtr|I1MAP0|I1MAP0_SOYBN1.00E-161Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G33800.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014551683721543-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001455s00037991.1PF00170.16bZIP_137662.00E-10
Glyur001455s00037991.1PF14144.1DOG11232003.70E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.607
SRR1783600control21.901
SRR1783602moderate drought stress38.251
SRR1811619moderate drought stress36.946

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.672
DRR006520Root Summer glycyrrhizin high producing strain25.698
DRR006521Root Winter glycyrrhizin high producing strain7.879
DRR006522Root Winter glycyrrhizin high producing strain7.896
DRR006523Root Summer glycyrrhizin low producing strain53.031
DRR006524Root Summer glycyrrhizin low producing strain51.418
DRR006525Leaf Summer glycyrrhizin high producing strain6.429
DRR006526Leaf Summer glycyrrhizin high producing strain6.428

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.048
SRR2868004Drought Stress(Tissue:root)23.306
SRR2967015Control (Tissue:root)34.325

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.606
SRR9715740Leave10.838
SRR9715741Leave10.925
SRR9715739Root5.079
SRR9715742Root20.594
SRR9715743Root15.228

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.166
SRR8749028MeJA induced 9h44.033
SRR8749029MeJA induced 9h11.789
SRR8749030Uninduced37.845
SRR8749031Uninduced10.828
SRR8749032Uninduced10.817

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.815
SRR8400027Control-Root24.803

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved