Gene detail information of Glyur001463s00032090.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G22250.30aspartate aminotransferase
NRXP_004504047.10PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Cicer arietinum]
COGYP_003289551.13.00E-163class I and II aminotransferase [Rhodothermus marinus DSM 4252]
Swissprottr|E9L7A5|PAT_PETHY0Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (Precursor)
trEMBLtr|I1KT56|I1KT56_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G14720.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014634005343992-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15849PAT, AAT EC:2.6.1.1 2.6.1.78 2.6.1.79 Biosynthesis of amino acids map01230
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Isoquinoline alkaloid biosynthesismap00950
Tropane, piperidine and pyridine alkaloid biosynthesismap00960


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001463s00032090.1PF00155.16Aminotran_1_21094712.80E-73


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control42.042
SRR1783600control41.856
SRR1783602moderate drought stress36.648
SRR1811619moderate drought stress36.199

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.339
DRR006520Root Summer glycyrrhizin high producing strain25.382
DRR006521Root Winter glycyrrhizin high producing strain24.838
DRR006522Root Winter glycyrrhizin high producing strain24.065
DRR006523Root Summer glycyrrhizin low producing strain26.139
DRR006524Root Summer glycyrrhizin low producing strain25.748
DRR006525Leaf Summer glycyrrhizin high producing strain35.353
DRR006526Leaf Summer glycyrrhizin high producing strain35.002

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)224.409
SRR2868004Drought Stress(Tissue:root)198.176
SRR2967015Control (Tissue:root)203.179

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave95.861
SRR9715740Leave72.280
SRR9715741Leave111.588
SRR9715739Root91.646
SRR9715742Root70.541
SRR9715743Root73.129

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h90.650
SRR8749028MeJA induced 9h116.726
SRR8749029MeJA induced 9h100.077
SRR8749030Uninduced223.846
SRR8749031Uninduced293.213
SRR8749032Uninduced183.977

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root159.194
SRR8400027Control-Root136.736

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved