Gene detail information of Glyur001481s00033620.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G08530.1051 kDa subunit of complex I
NRXP_003589961.10NADH-quinone oxidoreductase subunit F [Medicago truncatula]
COGYP_001414484.10NADH dehydrogenase I subunit F [Parvibaculum lavamentivorans DS-1]
Swissprottr|Q9FNN5|NDUV1_ARATH0NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Precursor)
trEMBLtr|I1JB64|I1JB64_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G00590.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0148112204709-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03942NDUFV1 EC:1.6.5.3 1.6.99.3 Oxidative phosphorylation map00190
Alzheimer's diseasemap05010
Parkinson's diseasemap05012
Huntington's diseasemap05016
Non-alcoholic fatty liver disease (NAFLD)map04932


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008137  NADH dehydrogenase (ubiquinone) activity

GO:0010181  FMN binding

GO:0016651  oxidoreductase activity, acting on NAD(P)H

GO:0051287  NAD binding

GO:0051539  4 iron, 4 sulfur cluster binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001481s00033620.1PF01512.12Complex1_51K972665.70E-47
Glyur001481s00033620.1PF10531.4SLBB2933421.20E-08
Glyur001481s00033620.1PF10589.4NADH_4Fe-4S3814267.00E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control63.718
SRR1783600control64.188
SRR1783602moderate drought stress58.707
SRR1811619moderate drought stress57.816

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain77.209
DRR006520Root Summer glycyrrhizin high producing strain76.728
DRR006521Root Winter glycyrrhizin high producing strain58.271
DRR006522Root Winter glycyrrhizin high producing strain56.094
DRR006523Root Summer glycyrrhizin low producing strain52.717
DRR006524Root Summer glycyrrhizin low producing strain53.280
DRR006525Leaf Summer glycyrrhizin high producing strain74.125
DRR006526Leaf Summer glycyrrhizin high producing strain73.354

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)167.143
SRR2868004Drought Stress(Tissue:root)125.401
SRR2967015Control (Tissue:root)116.331

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave91.156
SRR9715740Leave100.581
SRR9715741Leave78.270
SRR9715739Root107.047
SRR9715742Root97.655
SRR9715743Root100.630

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h91.466
SRR8749028MeJA induced 9h92.810
SRR8749029MeJA induced 9h79.504
SRR8749030Uninduced47.436
SRR8749031Uninduced41.281
SRR8749032Uninduced39.715

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root124.326
SRR8400027Control-Root114.384

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved