Gene detail information of Glyur001481s00033621.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G14340.10casein kinase I
NRXP_007223111.10hypothetical protein PRUPE_ppa005419mg [Prunus persica]
COGYP_632759.11.00E-17serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|M5XYH5|M5XYH5_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ24310.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014812016127205+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001481s00033621.1PF00069.20Pkinase92611.60E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.361
SRR1783600control12.631
SRR1783602moderate drought stress13.524
SRR1811619moderate drought stress13.552

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.402
DRR006520Root Summer glycyrrhizin high producing strain18.456
DRR006521Root Winter glycyrrhizin high producing strain22.020
DRR006522Root Winter glycyrrhizin high producing strain21.405
DRR006523Root Summer glycyrrhizin low producing strain20.502
DRR006524Root Summer glycyrrhizin low producing strain20.045
DRR006525Leaf Summer glycyrrhizin high producing strain20.524
DRR006526Leaf Summer glycyrrhizin high producing strain20.650

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.547
SRR2868004Drought Stress(Tissue:root)33.610
SRR2967015Control (Tissue:root)34.139

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.532
SRR9715740Leave28.423
SRR9715741Leave32.959
SRR9715739Root10.546
SRR9715742Root20.434
SRR9715743Root17.666

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.835
SRR8749028MeJA induced 9h20.163
SRR8749029MeJA induced 9h8.740
SRR8749030Uninduced6.757
SRR8749031Uninduced4.065
SRR8749032Uninduced5.090

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.612
SRR8400027Control-Root33.390

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved