Gene detail information of Glyur001481s00033622.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G14350.30AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
NRXP_003535228.10PREDICTED: serine/threonine-protein kinase 38-like isoform X1 [Glycine max]
COGYP_007203500.11.00E-24serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
Swissprottr|F4HYG2|IRE3_ARATH1.00E-80Probable serine/threonine protein kinase IRE3 {ECO:0000305}
trEMBLtr|K7LGQ9|K7LGQ9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G00830.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014814400751076-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001481s00033622.1PF00069.20Pkinase1224186.40E-64
Glyur001481s00033622.1PF00433.19Pkinase_C4374830.00023


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.846
SRR1783600control26.759
SRR1783602moderate drought stress19.835
SRR1811619moderate drought stress19.727

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.946
DRR006520Root Summer glycyrrhizin high producing strain34.703
DRR006521Root Winter glycyrrhizin high producing strain5.160
DRR006522Root Winter glycyrrhizin high producing strain5.087
DRR006523Root Summer glycyrrhizin low producing strain61.017
DRR006524Root Summer glycyrrhizin low producing strain61.099
DRR006525Leaf Summer glycyrrhizin high producing strain18.062
DRR006526Leaf Summer glycyrrhizin high producing strain17.787

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)55.476
SRR2868004Drought Stress(Tissue:root)59.250
SRR2967015Control (Tissue:root)53.726

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave51.244
SRR9715740Leave47.813
SRR9715741Leave61.492
SRR9715739Root9.024
SRR9715742Root39.518
SRR9715743Root31.302

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h46.994
SRR8749028MeJA induced 9h54.546
SRR8749029MeJA induced 9h51.191
SRR8749030Uninduced31.807
SRR8749031Uninduced28.641
SRR8749032Uninduced18.170

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root53.380
SRR8400027Control-Root66.683

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved