Gene detail information of Glyur001484s00040278.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G37710.10receptor lectin kinase
NRXP_004492166.10PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Cicer arietinum]
COGYP_003640725.11.00E-24serine/threonine protein kinase [Thermincola potens JR]
Swissprottr|O80939|LRK41_ARATH0L-type lectin-domain containing receptor kinase IV.1 (Precursor)
trEMBLtr|Q6UY59|Q6UY59_MEDTR0Lectin-like receptor kinase 7;2 {ECO:0000313|EMBL:AAR11299.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014844379045841+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001484s00040278.1PF00139.14Lectin_legB222592.80E-83
Glyur001484s00040278.1PF00069.20Pkinase3455481.10E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.139
SRR1783600control2.176
SRR1783602moderate drought stress1.745
SRR1811619moderate drought stress1.716

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.790
DRR006520Root Summer glycyrrhizin high producing strain0.851
DRR006521Root Winter glycyrrhizin high producing strain0.652
DRR006522Root Winter glycyrrhizin high producing strain0.505
DRR006523Root Summer glycyrrhizin low producing strain0.350
DRR006524Root Summer glycyrrhizin low producing strain0.538
DRR006525Leaf Summer glycyrrhizin high producing strain11.584
DRR006526Leaf Summer glycyrrhizin high producing strain11.199

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.743
SRR2868004Drought Stress(Tissue:root)1.268
SRR2967015Control (Tissue:root)1.163

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.704
SRR9715740Leave4.046
SRR9715741Leave5.122
SRR9715739Root0.201
SRR9715742Root2.356
SRR9715743Root1.907

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.002
SRR8749028MeJA induced 9h1.837
SRR8749029MeJA induced 9h0.873
SRR8749030Uninduced0.941
SRR8749031Uninduced0.430
SRR8749032Uninduced0.373

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.483
SRR8400027Control-Root0.812

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved