Gene detail information of Glyur001494s00040550.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78080.16.00E-56related to AP2 4
NRXP_004514265.11.16E-134PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Cicer arietinum]
Swissprottr|Q8H1E4|RAP24_ARATH5.00E-90Ethylene-responsive transcription factor RAP2-4
trEMBLtr|D4P537|D4P537_9FABA2.00E-129DREB2 {ECO:0000313|EMBL:ADD69957.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014944770548637-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001494s00040550.1PF00847.15AP21381874.60E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control134.921
SRR1783600control150.905
SRR1783602moderate drought stress158.078
SRR1811619moderate drought stress157.599

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1052.013
DRR006520Root Summer glycyrrhizin high producing strain1050.093
DRR006521Root Winter glycyrrhizin high producing strain33.717
DRR006522Root Winter glycyrrhizin high producing strain29.730
DRR006523Root Summer glycyrrhizin low producing strain1527.887
DRR006524Root Summer glycyrrhizin low producing strain1321.844
DRR006525Leaf Summer glycyrrhizin high producing strain262.903
DRR006526Leaf Summer glycyrrhizin high producing strain266.103

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)97.484
SRR2868004Drought Stress(Tissue:root)205.910
SRR2967015Control (Tissue:root)404.651

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave337.833
SRR9715740Leave312.250
SRR9715741Leave293.867
SRR9715739Root788.479
SRR9715742Root1035.770
SRR9715743Root937.849

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h237.312
SRR8749028MeJA induced 9h137.266
SRR8749029MeJA induced 9h90.234
SRR8749030Uninduced126.134
SRR8749031Uninduced94.978
SRR8749032Uninduced58.764

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root279.957
SRR8400027Control-Root455.939

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved