Gene detail information of Glyur001503s00028865.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G64220.20Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
NRXP_004504800.10PREDICTED: calmodulin-binding transcription activator 2-like isoform X1 [Cicer arietinum]
COGYP_001975179.14.00E-06ankyrin repeat domain protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel]
Swissprottr|Q6NPP4|CMTA2_ARATH0Calmodulin-binding transcription activator 2
trEMBLtr|K7KPP6|K7KPP6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G24430.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold015035637365498-


Gene family

Gene familysubfamily
Transcription Factors FamilyCAMTA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001503s00028865.1PF03859.11CG-1221361.50E-53
Glyur001503s00028865.1PF12796.2Ank_26867546.40E-08
Glyur001503s00028865.1PF00612.22IQ9079250.006
Glyur001503s00028865.1PF00612.22IQ9319490.00017


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.320
SRR1783600control22.332
SRR1783602moderate drought stress26.336
SRR1811619moderate drought stress25.979

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.621
DRR006520Root Summer glycyrrhizin high producing strain42.351
DRR006521Root Winter glycyrrhizin high producing strain24.924
DRR006522Root Winter glycyrrhizin high producing strain24.163
DRR006523Root Summer glycyrrhizin low producing strain58.656
DRR006524Root Summer glycyrrhizin low producing strain58.652
DRR006525Leaf Summer glycyrrhizin high producing strain17.011
DRR006526Leaf Summer glycyrrhizin high producing strain17.196

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)51.011
SRR2868004Drought Stress(Tissue:root)67.342
SRR2967015Control (Tissue:root)53.343

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave69.010
SRR9715740Leave37.331
SRR9715741Leave86.231
SRR9715739Root8.745
SRR9715742Root63.799
SRR9715743Root52.814

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h52.217
SRR8749028MeJA induced 9h77.201
SRR8749029MeJA induced 9h75.346
SRR8749030Uninduced69.890
SRR8749031Uninduced129.354
SRR8749032Uninduced77.025

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root49.578
SRR8400027Control-Root54.667

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved