Gene detail information of Glyur001507s00032439.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15050.17.00E-148Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
NRAES74697.20BGGP beta-1-3-galactosyl-O-glycosyl-glycoprotein [Medicago truncatula]
trEMBLtr|G7KKG8|G7KKG8_MEDTR0BGGP beta-1-3-galactosyl-O-glycosyl-glycoprotein {ECO:0000313|EMBL:AES74697.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0150715665419-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT14


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0008375  acetylglucosaminyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001507s00032439.1PF02485.16Branch852442.70E-40
Glyur001507s00032439.1PF02485.16Branch2613062.20E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control46.638
SRR1783600control46.873
SRR1783602moderate drought stress39.413
SRR1811619moderate drought stress38.450

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain49.026
DRR006520Root Summer glycyrrhizin high producing strain49.615
DRR006521Root Winter glycyrrhizin high producing strain31.055
DRR006522Root Winter glycyrrhizin high producing strain29.466
DRR006523Root Summer glycyrrhizin low producing strain57.163
DRR006524Root Summer glycyrrhizin low producing strain55.604
DRR006525Leaf Summer glycyrrhizin high producing strain25.780
DRR006526Leaf Summer glycyrrhizin high producing strain25.794

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.528
SRR2868004Drought Stress(Tissue:root)45.024
SRR2967015Control (Tissue:root)44.394

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.653
SRR9715740Leave13.635
SRR9715741Leave23.050
SRR9715739Root15.971
SRR9715742Root28.386
SRR9715743Root28.084

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.251
SRR8749028MeJA induced 9h64.360
SRR8749029MeJA induced 9h30.886
SRR8749030Uninduced36.722
SRR8749031Uninduced28.468
SRR8749032Uninduced16.660

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.161
SRR8400027Control-Root46.296

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved