Gene detail information of Glyur001507s00032449.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01310.1 | 9.00E-143 | Phosphoglycerate mutase-like family protein |
| NR | XP_003554874.1 | 0 | PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like isoform X1 [Glycine max] |
| trEMBL | tr|A0A072U5M4|A0A072U5M4_MEDTR | 0 | Phosphoglycerate mutase-like protein {ECO:0000313|EMBL:KEH24962.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01507 | 57022 | 68113 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13024 | PPIP5K, VIP | EC:2.7.4.24 | Phosphatidylinositol signaling system | map04070 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.271 |
| SRR1783600 | control | 0.301 |
| SRR1783602 | moderate drought stress | 0.506 |
| SRR1811619 | moderate drought stress | 0.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.185 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.350 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.036 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.580 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.897 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.788 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.201 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.129 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.593 |
| SRR2967015 | Control (Tissue:root) | 7.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.437 |
| SRR9715740 | Leave | 0.183 |
| SRR9715741 | Leave | 0.363 |
| SRR9715739 | Root | 0.271 |
| SRR9715742 | Root | 0.791 |
| SRR9715743 | Root | 0.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.308 |
| SRR8749028 | MeJA induced 9h | 0.593 |
| SRR8749029 | MeJA induced 9h | 0.281 |
| SRR8749030 | Uninduced | 0.061 |
| SRR8749031 | Uninduced | 0.069 |
| SRR8749032 | Uninduced | 0.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.371 |
| SRR8400027 | Control-Root | 1.023 |