Gene detail information of Glyur001518s00034893.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G39890.17.00E-30Protein of unknown function (DUF1637)
NRXP_004489672.15.73E-78PREDICTED: 2-aminoethanethiol dioxygenase-like [Cicer arietinum]
trEMBLtr|C6TGT8|C6TGT8_SOYBN7.00E-78Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G24120.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0151834268116+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10712ADO EC:1.13.11.19 Taurine and hypotaurine metabolism map00430


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0047800  cysteamine dioxygenase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001518s00034893.1PF07847.7DUF1637801672.00E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.414
SRR1783600control0.326
SRR1783602moderate drought stress0.159
SRR1811619moderate drought stress0.158

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.437
DRR006520Root Summer glycyrrhizin high producing strain2.047
DRR006521Root Winter glycyrrhizin high producing strain294.554
DRR006522Root Winter glycyrrhizin high producing strain286.028
DRR006523Root Summer glycyrrhizin low producing strain8.315
DRR006524Root Summer glycyrrhizin low producing strain8.715
DRR006525Leaf Summer glycyrrhizin high producing strain0.179
DRR006526Leaf Summer glycyrrhizin high producing strain0.129

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.604
SRR2868004Drought Stress(Tissue:root)0.600
SRR2967015Control (Tissue:root)0.266

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.092
SRR9715740Leave0.131
SRR9715741Leave0.690
SRR9715739Root0.813
SRR9715742Root0.943
SRR9715743Root0.826

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h257.026
SRR8749028MeJA induced 9h647.759
SRR8749029MeJA induced 9h627.130
SRR8749030Uninduced1024.705
SRR8749031Uninduced1097.442
SRR8749032Uninduced722.836

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.613
SRR8400027Control-Root9.592

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved