Gene detail information of Glyur001519s00034462.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01250.11.00E-21Integrase-type DNA-binding superfamily protein
NRAES87852.29.69E-65DNA-binding domain protein [Medicago truncatula]
Swissprottr|Q1ECI2|ERF23_ARATH4.00E-31Ethylene-responsive transcription factor ERF023
trEMBLtr|G7JRD3|G7JRD3_MEDTR4.00E-65DNA-binding domain protein {ECO:0000313|EMBL:AES87852.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold015191517715812+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001519s00034462.1PF00847.15AP235844.30E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.318
SRR1783600control1.360
SRR1783602moderate drought stress5.555
SRR1811619moderate drought stress5.475

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.125
DRR006520Root Summer glycyrrhizin high producing strain36.551
DRR006521Root Winter glycyrrhizin high producing strain0.526
DRR006522Root Winter glycyrrhizin high producing strain0.508
DRR006523Root Summer glycyrrhizin low producing strain157.842
DRR006524Root Summer glycyrrhizin low producing strain158.808
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.187
SRR2868004Drought Stress(Tissue:root)2.851
SRR2967015Control (Tissue:root)2.073

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.686
SRR9715740Leave27.584
SRR9715741Leave17.849
SRR9715739Root325.822
SRR9715742Root80.784
SRR9715743Root114.388

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h57.187
SRR8749028MeJA induced 9h37.030
SRR8749029MeJA induced 9h55.277
SRR8749030Uninduced292.376
SRR8749031Uninduced16.438
SRR8749032Uninduced64.648

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.107
SRR8400027Control-Root17.206

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved