Gene detail information of Glyur001519s00034467.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10350.1 | 3.00E-24 | NAC domain containing protein 70 |
| NR | XP_003533525.1 | 2.24E-61 | PREDICTED: protein BEARSKIN1 [Glycine max] |
| Swissprot | tr|Q9C878|BRN1_ARATH | 9.00E-28 | Protein BEARSKIN1 |
| trEMBL | tr|I1LNQ4|I1LNQ4_SOYBN | 6.00E-58 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G00540.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01519 | 46662 | 50073 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001519s00034467.1 | PF02365.10 | NAM | 8 | 77 | 2.50E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.096 |
| SRR1811619 | moderate drought stress | 0.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.137 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.274 |
| SRR2967015 | Control (Tissue:root) | 7.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.730 |
| SRR8749028 | MeJA induced 9h | 3.092 |
| SRR8749029 | MeJA induced 9h | 4.117 |
| SRR8749030 | Uninduced | 0.815 |
| SRR8749031 | Uninduced | 1.628 |
| SRR8749032 | Uninduced | 0.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.396 |
| SRR8400027 | Control-Root | 0.329 |