Gene detail information of Glyur001528s00028663.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G44080.18.00E-15Basic-leucine zipper (bZIP) transcription factor family protein
NRAFK48693.11.87E-33unknown [Lotus japonicus]
Swissprottr|P42777|GBF4_ARATH1.00E-24G-box-binding factor 4
trEMBLtr|I3T851|I3T851_LOTJA7.00E-34Uncharacterized protein {ECO:0000313|EMBL:AFK48693.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold015282793028644+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001528s00028663.1PF00170.16bZIP_11181636.00E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.220
SRR1783600control0.184
SRR1783602moderate drought stress0.369
SRR1811619moderate drought stress0.415

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.888
DRR006520Root Summer glycyrrhizin high producing strain4.474
DRR006521Root Winter glycyrrhizin high producing strain0.743
DRR006522Root Winter glycyrrhizin high producing strain0.725
DRR006523Root Summer glycyrrhizin low producing strain2.395
DRR006524Root Summer glycyrrhizin low producing strain2.217
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.578
SRR2868004Drought Stress(Tissue:root)0.946
SRR2967015Control (Tissue:root)2.364

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.000
SRR9715740Leave0.000
SRR9715741Leave0.211
SRR9715739Root0.290
SRR9715742Root0.103
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.224
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.425
SRR8400027Control-Root0.257