Gene detail

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Gene detail information of Glyur001529s00032034.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G78940.2	0	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NR	XP_006595204.1	0	PREDICTED: U-box domain-containing protein 35-like [Glycine max]
COG	YP_008151634.1	1.00E-24	hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprot	tr\|Q9SW11\|PUB35_ARATH	9.00E-145	Serine/threonine-protein kinase
trEMBL	tr\|I1M619\|I1M619_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G45050.1}

Sequence

Transcript Sequence

>Glyur001529s00032034.1
ATGTGGCTTCAAAATCCTAAGGCGTCGGGGATTAGAAAGGGAGGAGGAGGAGGAGGAAATGGATTGGTGGCAGTGGCTATAGACAAGGATAAAGGAAGCCAATACGCTCTTAAATGGGCCGCCGATAGTCTTCTTTCCAGAGGCCAAACCATTATTCTAATCCACGTCTCGCACCCCACATCCTCGGTTTCCAGAGGTAGCGAGGCCATTGTAACTAACATCAGCAGTTCTGCTGCATCTCAACTGAGACACCAACTTGATAACACTACCAGGGATCTGTTTCTTACCTTCCATTGCTATTGTACACGCAAAGATATACAATGCCTTGATGTCCTACTTGAAGACACTGATGTTGTGAAAGCAATAACAGAATATGTTTCTTATGCTGCAATTGAGAACTTGGTGGTTGGTGCAACATCAAGACATGGTTTTATTAGGTTTAAGTCATCAACTACACCAAGCGGCATATCAAAGGGGGCACCAGATTTCTGTACTGTTTATGTTATTTCTAAGGGGAAAATCTCGTCAGTTCGGAGTGCTTCTCGTTCAACCCCGCATACCTCCCCGCTGCTAAGCCATATACATGATCTAAATAACCCGGATGCAAATCAACCTGAGATAAGCTCTAAACGTATGAACTTGAAAGACAGGACATCAATGAAACCTCACGGTTGGCAAGATGAATCTATGAAGTCTCCATTTGGGAGAGGGATGAGTGGAATGTTATGCGTGGACTTCACAGATTCAGATACAGACATATCATTCGTAAGCTCTGGGAGGCCAAGCAGTGGATGTTCATCCGTTTATGACTATCTTGATTCGGGTCGAACTTCACGAGTTTCTACCAGTTCAGATCGTAGCTTTGGATCCAACCGATTGGGACTCAAGTTCACTGACCCCAGTTCACCAGATACATCATTTTCACAGGAAAGCATTGGAACATCATTTTCATATTCGTCTCAAAACATGGATGAAGCAGAAGCTGATATGAGGAGGCTGAGGCTTGAGTTAAAGCAAACGATGGACATGTACGGTACAGCATGCAAAGAAGCACTTACAGCACAACAAAAGTTAATGGAGCTAAACCACTGGCGAGTGGAGGAAGAAAGAAAATTAGAAGAAGCACGATTGGCCCAGGAAGCTGCGCTGGCAATTGCAGAGAAAGAGAAAGCAAGAAGTAAGGTGGCTATGGAAACAGCCGAAGCATCTAGAAAAATTGCTCAGGTGGAATTACATAAAAGAGCAAATGTTGAAGTTAAAGCCCTTAAAGAAGCAGAGGAAATGAGAAAGCTATTGGATAATATAGCCCAATCTGATGCNAGATATAGGAGATACACTGTTGAGGAGATTGAAGCAGCCACGAACTTCTTTTCTGCAACACAAAAAATTGGGGAAGGAGGTTATGGCCCTGTTTATAAATGTTACCTTGATCACACTCCAGTGGCCGTCAAGGTTTTACGTCCAGATGCTGCTCAAGGGAAAGAACAGTTTCAGCAAGAGATTGACATACTGAGCTGTATGCGCCACCCAAACTTGGTGCTTCTTCTAGGAGCGTGTCCAGAGTATGGCATATTAGTTTATGAATATATGGCGAATGGAAGCTTAGAAGATTGTCTCTTTAGAAAAAAGAACAACAGGGTTCTGCCTTGGCAGCTCAGGTTCCGAATTGCTGCAGAGTTAGCTACCGGCTTGCTATTCCTCCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATTTGAAACCCGGCAACATTTTGCTAGACCAGAATTATGTGAGTAAGATTAGTGATGTTGGGTTGGCAAGGCTGGTCCCTGTGGTAGCTGAAAATGTAACACAATGTCGCATGACATCAGCAGCTGGAACTTTCTGTTATATTGATCCNGAGTATCAGCAAACTGGAATGCTTGGTGTCAAGTCTGATGTTTATTCTTTGGGGATCATCTTTCTACAATTATTGACGGGCAGGTCTCCAATGGGATTGGCTCACCATGCTGAACAGTCTATTGAGAATGACACATTTGCAGAAATGCTGGACCCATCTCTCACTGACTGGCCTCTTGAAGAAGCCTTGTGCCTTGCAAAGATAGCAATCAAATGTGCAGAACTGAGGCGAAAAGATCGGCCAGACCTAGGGAACGTAGTGTTGCCAGAGCTTAATAAACTCAGAGAGTTTGCCGAAGAAAAGATGAGTCCCNTCTTTTTAGGAGGCATTAATTGTGCTGTCCCTTCCCCCAACCACAGTGAAGCTTCTGTGCAGCAGGATGTGATGAGTGACCCACGGCTTGTACATTCAGGAAGCTCAATAAGTCCATCCACTCCATCAACGCCGACAGAAGGAAAACATTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01529	14924	19385	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.14.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0006950 response to stress

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001529s00032034.1	PF00582.21	Usp	23	152	1.10E-10
Glyur001529s00032034.1	PF00069.20	Pkinase	459	711	1.80E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.078
SRR1783600	control	0.078
SRR1783602	moderate drought stress	0.446
SRR1811619	moderate drought stress	0.440

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.827
DRR006520	Root Summer glycyrrhizin high producing strain	0.817
DRR006521	Root Winter glycyrrhizin high producing strain	0.338
DRR006522	Root Winter glycyrrhizin high producing strain	0.323
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.879
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.072

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.461
SRR2868004	Drought Stress(Tissue:root)	0.331
SRR2967015	Control (Tissue:root)	0.379

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	1.954
SRR9715740	Leave	2.540
SRR9715741	Leave	0.320
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.013

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.095
SRR8749028	MeJA induced 9h	0.057
SRR8749029	MeJA induced 9h	0.061
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.065
SRR8749032	Uninduced	0.012

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.506
SRR8400027	Control-Root	2.293