Gene detail information of Glyur001529s00032036.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78930.11.00E-156Mitochondrial transcription termination factor family protein
NRKEH24711.10transcription termination factor family protein [Medicago truncatula]
trEMBLtr|A0A072U5S3|A0A072U5S3_MEDTR0Transcription termination factor family protein {ECO:0000313|EMBL:KEH24711.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold015293240239017+


Gene family

Gene familysubfamily
Transcription Factors FamilymTERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005739  mitochondrion


molecular_function

GO:0003690  double-stranded DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001529s00032036.1PF02536.9mTERF2325801.10E-81


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.051
SRR1783600control10.159
SRR1783602moderate drought stress8.831
SRR1811619moderate drought stress8.846

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.258
DRR006520Root Summer glycyrrhizin high producing strain9.232
DRR006521Root Winter glycyrrhizin high producing strain1.128
DRR006522Root Winter glycyrrhizin high producing strain1.128
DRR006523Root Summer glycyrrhizin low producing strain8.332
DRR006524Root Summer glycyrrhizin low producing strain8.387
DRR006525Leaf Summer glycyrrhizin high producing strain7.096
DRR006526Leaf Summer glycyrrhizin high producing strain7.071

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.961
SRR2868004Drought Stress(Tissue:root)6.957
SRR2967015Control (Tissue:root)8.898

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.702
SRR9715740Leave13.481
SRR9715741Leave10.083
SRR9715739Root4.264
SRR9715742Root7.835
SRR9715743Root6.253

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.955
SRR8749028MeJA induced 9h5.248
SRR8749029MeJA induced 9h3.585
SRR8749030Uninduced1.199
SRR8749031Uninduced0.865
SRR8749032Uninduced0.689

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.894
SRR8400027Control-Root12.086

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved