Gene detail information of Glyur001531s00034061.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03500.1 | 2.00E-87 | Homeodomain-like superfamily protein |
| NR | XP_007138330.1 | 2.93E-172 | hypothetical protein PHAVU_009G199700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LTH4|PCLL_ARATH | 6.00E-14 | Transcription factor BOA |
| trEMBL | tr|V7AXN0|V7AXN0_PHAVU | 1.00E-172 | Uncharacterized protein {ECO:0000313|EMBL:ESW10324.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01531 | 20366 | 24081 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001531s00034061.1 | PF00249.26 | Myb_DNA-binding | 264 | 315 | 9.00E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.983 |
| SRR1783600 | control | 2.105 |
| SRR1783602 | moderate drought stress | 2.577 |
| SRR1811619 | moderate drought stress | 2.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.421 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.963 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.377 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.263 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.536 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.093 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.933 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.127 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.579 |
| SRR2967015 | Control (Tissue:root) | 6.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.456 |
| SRR9715740 | Leave | 0.970 |
| SRR9715741 | Leave | 1.426 |
| SRR9715739 | Root | 0.339 |
| SRR9715742 | Root | 4.345 |
| SRR9715743 | Root | 3.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.132 |
| SRR8400027 | Control-Root | 2.674 |