Gene detail information of Glyur001533s00032751.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10370.1 | 1.00E-27 | Glutathione S-transferase family protein |
| NR | XP_004309307.1 | 1.06E-36 | PREDICTED: glutathione S-transferase U17-like, partial [Fragaria vesca subsp. vesca] |
| COG | YP_004467919.1 | 3.00E-06 | maleylacetoacetate isomerase [Alteromonas sp. SN2] |
| Swissprot | tr|Q9FUS8|GSTUH_ARATH | 4.00E-33 | Glutathione S-transferase U17 |
| trEMBL | tr|M5XG18|M5XG18_PRUPE | 3.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:EMJ25067.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01533 | 4078 | 6825 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001533s00032751.1 | PF13417.1 | GST_N_3 | 9 | 78 | 9.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.489 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.048 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.074 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 42.816 |
| SRR9715740 | Leave | 0.825 |
| SRR9715741 | Leave | 9.535 |
| SRR9715739 | Root | 0.115 |
| SRR9715742 | Root | 0.651 |
| SRR9715743 | Root | 0.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.095 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.040 |
| SRR8400027 | Control-Root | 0.350 |