Gene detail information of Glyur001534s00033648.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G10290.10leucine-rich repeat transmembrane protein kinase family protein
NRADO15297.10somatic embryogenesis receptor kinase-like protein 3 [Medicago truncatula]
COGYP_007319008.14.00E-21hypothetical protein FAES_0403 [Fibrella aestuarina BUZ 2]
Swissprottr|C0LGT1|Y5129_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At5g10290 (Precursor)
trEMBLtr|E2IXG7|E2IXG7_MEDTR0Somatic embryogenesis receptor kinase-like protein 3 {ECO:0000313|EMBL:ADO15297.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold015344926957336-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001534s00033648.1PF08263.7LRRNT_229662.80E-10
Glyur001534s00033648.1PF12799.2LRR_4931305.50E-09
Glyur001534s00033648.1PF00560.28LRR_11421640.4
Glyur001534s00033648.1PF00069.20Pkinase3126045.40E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.854
SRR1783600control9.909
SRR1783602moderate drought stress7.489
SRR1811619moderate drought stress7.406

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.502
DRR006520Root Summer glycyrrhizin high producing strain17.432
DRR006521Root Winter glycyrrhizin high producing strain15.880
DRR006522Root Winter glycyrrhizin high producing strain15.575
DRR006523Root Summer glycyrrhizin low producing strain13.393
DRR006524Root Summer glycyrrhizin low producing strain13.523
DRR006525Leaf Summer glycyrrhizin high producing strain10.842
DRR006526Leaf Summer glycyrrhizin high producing strain10.785

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.350
SRR2868004Drought Stress(Tissue:root)34.282
SRR2967015Control (Tissue:root)31.397

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.961
SRR9715740Leave23.407
SRR9715741Leave27.544
SRR9715739Root2.019
SRR9715742Root10.214
SRR9715743Root9.469

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.941
SRR8749028MeJA induced 9h25.056
SRR8749029MeJA induced 9h12.064
SRR8749030Uninduced18.961
SRR8749031Uninduced9.714
SRR8749032Uninduced7.661

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.311
SRR8400027Control-Root32.489

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved