Gene detail information of Glyur001541s00033563.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05680.1 | 2.00E-71 | Uridine diphosphate glycosyltransferase 74E2 |
| NR | KEH25944.1 | 5.41E-165 | UDP-glucosyltransferase family protein [Medicago truncatula] |
| Swissprot | tr|Q9SYK9|U74E2_ARATH | 1.00E-84 | UDP-glycosyltransferase 74E2 |
| trEMBL | tr|A0A072U870|A0A072U870_MEDTR | 2.00E-165 | UDP-glucosyltransferase family protein {ECO:0000313|EMBL:KEH25944.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01541 | 39900 | 41774 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001541s00033563.1 | PF00201.13 | UDPGT | 227 | 288 | 1.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.049 |
| SRR1783600 | control | 10.305 |
| SRR1783602 | moderate drought stress | 6.598 |
| SRR1811619 | moderate drought stress | 6.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.480 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.270 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.056 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.116 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.118 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.019 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.712 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 30.887 |
| SRR2868004 | Drought Stress(Tissue:root) | 24.368 |
| SRR2967015 | Control (Tissue:root) | 25.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.544 |
| SRR9715740 | Leave | 1.752 |
| SRR9715741 | Leave | 4.249 |
| SRR9715739 | Root | 0.681 |
| SRR9715742 | Root | 3.014 |
| SRR9715743 | Root | 3.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.598 |
| SRR8749028 | MeJA induced 9h | 0.690 |
| SRR8749029 | MeJA induced 9h | 0.855 |
| SRR8749030 | Uninduced | 0.064 |
| SRR8749031 | Uninduced | 0.017 |
| SRR8749032 | Uninduced | 0.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.512 |
| SRR8400027 | Control-Root | 5.242 |