Gene detail

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Gene detail information of Glyur001544s00035568.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G37130.1	5.00E-115	Peroxidase superfamily protein
NR	AFK33615.1	3.58E-176	unknown [Lotus japonicus]
Swissprot	tr\|Q42580\|PER21_ARATH	2.00E-143	Peroxidase 21 (Precursor)
trEMBL	tr\|I3S023\|I3S023_LOTJA	1.00E-176	Uncharacterized protein {ECO:0000313\|EMBL:AFK33615.1}

Sequence

Transcript Sequence

>Glyur001544s00035568.1
ATATGGCCGCCAAGCCTCATTCTAAAATCTGTTTCCTCCTTCTATTGCTTCTCATACATTTTAATTTGGGAGAAAGCCAACTTCAGTTGAATTACTACTCCAGCAGCTGCCCAAAAGCGGAAGAGATCATCAAACAANAAGTCACCCAACTATATAACAAGCACGGGAACACAGCCGTTTCGTGGTCATGCGATGCATCCCTACTATTAGCGACGNTGGGCGGTGTAGTGTCGGAGCAGACATCGGAGAGAAGTTTTGGGATGAGAAACTTCAAGTACGTCAACACCATCAAAGCGGCCGTTGAGGAAGAATGCCCCTCCACCTTGGGAGGACCAAGCATCGAAATGAAGACTGGGCGAAGGGATAGCAGAGAAAGCTATGCAACGGTGGTGGAAGACTTCATTCCAAACCACAATGACTCAATGTCCTTAGTGCTCTCTCGTTTTCAAGCCATTGGCATTGACGTTGAAGCCACCGTCGCTCTTTTAGGGGCACACTCAGTGGGAAGAATTCACTGCAAGAATATGGTGCAAAGNCTATACCCAAATGTGGACGAAACGTTGGACCCAACACACGCTGCGTACTTGAAACGTAGGTGCCCAACACCGAATCCAGATCCAAAGGCTGTTCAATATTCGAGGAACGACCTAAAAACACCCATGATCATTGACAACAACTACTACAAGAACATTTTGCAACACAAGGGACTCCTCACTGTGGANGAAGAACTTGCANCTGACCCAAGAACCTCACCTTTTGTACAAAAGATGGCTGATGATAATGGATACTTCCATGAACAATTCTCAAGGGCCATTCTCTTGTTATCTGAGAATAATCCCCTCACTGGAGATCAAGGTGAAATCAGAAAGGATTGTCGCTACGTCAATGCCAATTAGATATTTGNTTTTTTGGATAGNCAAATATNAGTAAATTAGTATGTTATGTCAGTAGGAGAGNTTTCAACTCATGACCTCTTTATCACTCCAATCCCTAAATTAACTAGCTTGCCTTCTTTTTGTGCGGGAAAACGTGTGTGTGTGTTTGTTTAATTTTCATAGAGTAATATTACAC

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01544	46487	56934	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function GO:0004601 peroxidase activity GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001544s00035568.1	PF00141.18	peroxidase	108	259	1.20E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.023
SRR1783600	control	6.337
SRR1783602	moderate drought stress	6.907
SRR1811619	moderate drought stress	6.451

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	40.143
DRR006520	Root Summer glycyrrhizin high producing strain	40.795
DRR006521	Root Winter glycyrrhizin high producing strain	4.592
DRR006522	Root Winter glycyrrhizin high producing strain	4.921
DRR006523	Root Summer glycyrrhizin low producing strain	41.266
DRR006524	Root Summer glycyrrhizin low producing strain	41.753
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.413
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.191

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	52.370
SRR2868004	Drought Stress(Tissue:root)	176.504
SRR2967015	Control (Tissue:root)	40.161

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	1.528
SRR9715740	Leave	0.764
SRR9715741	Leave	3.564
SRR9715739	Root	15.784
SRR9715742	Root	46.406
SRR9715743	Root	35.472

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.369
SRR8749028	MeJA induced 9h	100.379
SRR8749029	MeJA induced 9h	8.425
SRR8749030	Uninduced	46.836
SRR8749031	Uninduced	11.087
SRR8749032	Uninduced	1.842

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	36.587
SRR8400027	Control-Root	12.207