Gene detail information of Glyur001562s00037199.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G19940.21.00E-163oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding
NRXP_004498172.10PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic-like [Cicer arietinum]
COGYP_421156.11.00E-163N-acetyl-gamma-glutamyl-phosphate reductase [Magnetospirillum magneticum AMB-1]
Swissprottr|Q93Z70|ARGC_ARATH0Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic (Precursor)
trEMBLtr|G7I708|G7I708_MEDTR0N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|RuleBase:RU004038}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold015622665440530-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00145argC EC:1.2.1.38 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220


Gene Ontology

biological_process

GO:0006526  arginine biosynthetic process

GO:0008652  cellular amino acid biosynthetic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003942  N-acetyl-gamma-glutamyl-phosphate reductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

GO:0046983  protein dimerization activity

GO:0051287  NAD binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001562s00037199.1PF01118.19Semialdhyde_dh471841.90E-27
Glyur001562s00037199.1PF02774.13Semialdhyde_dhC2013596.70E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.734
SRR1783600control15.984
SRR1783602moderate drought stress13.888
SRR1811619moderate drought stress13.874

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.943
DRR006520Root Summer glycyrrhizin high producing strain24.825
DRR006521Root Winter glycyrrhizin high producing strain11.761
DRR006522Root Winter glycyrrhizin high producing strain11.294
DRR006523Root Summer glycyrrhizin low producing strain17.817
DRR006524Root Summer glycyrrhizin low producing strain17.523
DRR006525Leaf Summer glycyrrhizin high producing strain18.438
DRR006526Leaf Summer glycyrrhizin high producing strain18.388

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.481
SRR2868004Drought Stress(Tissue:root)25.778
SRR2967015Control (Tissue:root)22.210

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.555
SRR9715740Leave22.787
SRR9715741Leave23.049
SRR9715739Root17.382
SRR9715742Root24.197
SRR9715743Root22.557

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.917
SRR8749028MeJA induced 9h23.532
SRR8749029MeJA induced 9h11.527
SRR8749030Uninduced7.107
SRR8749031Uninduced2.097
SRR8749032Uninduced3.127

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.412
SRR8400027Control-Root32.290

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved