Gene detail information of Glyur001572s00035827.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38110.10glycerol-3-phosphate acyltransferase 6
NRXP_010109641.10hypothetical protein L484_015596 [Morus notabilis]
Swissprottr|O80437|GPAT6_ARATH0Glycerol-3-phosphate 2-O-acyltransferase 6
trEMBLtr|W9S2X1|W9S2X1_9ROSA0Uncharacterized protein {ECO:0000313|EMBL:EXC23686.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold015725033153707-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13508GPAT EC:2.3.1.15 Glycerolipid metabolism map00561
Glycerophospholipid metabolismmap00564


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001572s00035827.1PF12710.2HAD242011.00E-10
Glyur001572s00035827.1PF01553.16Acyltransferase2513663.00E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.651
SRR1783600control22.708
SRR1783602moderate drought stress17.158
SRR1811619moderate drought stress16.729

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.062
DRR006520Root Summer glycyrrhizin high producing strain0.070
DRR006521Root Winter glycyrrhizin high producing strain0.072
DRR006522Root Winter glycyrrhizin high producing strain0.043
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain122.918
DRR006526Leaf Summer glycyrrhizin high producing strain120.569

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)65.872
SRR2868004Drought Stress(Tissue:root)38.281
SRR2967015Control (Tissue:root)35.420

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave47.774
SRR9715740Leave32.212
SRR9715741Leave65.781
SRR9715739Root29.271
SRR9715742Root11.907
SRR9715743Root15.789

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.109
SRR8749029MeJA induced 9h0.089
SRR8749030Uninduced0.041
SRR8749031Uninduced0.084
SRR8749032Uninduced0.103

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root80.409
SRR8400027Control-Root70.684

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved