Gene detail information of Glyur001577s00033501.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03690.1 | 9.00E-119 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| NR | XP_004493223.1 | 0 | PREDICTED: xylosyltransferase 1-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|I1N8E6|I1N8E6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G29570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01577 | 16210 | 19587 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT14 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001577s00033501.1 | PF02485.16 | Branch | 57 | 315 | 1.40E-63 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.753 |
| SRR1783600 | control | 3.800 |
| SRR1783602 | moderate drought stress | 4.381 |
| SRR1811619 | moderate drought stress | 4.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.433 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.781 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.506 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.330 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.896 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.748 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.997 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.365 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.044 |
| SRR2967015 | Control (Tissue:root) | 16.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.892 |
| SRR9715740 | Leave | 8.557 |
| SRR9715741 | Leave | 7.431 |
| SRR9715739 | Root | 2.735 |
| SRR9715742 | Root | 5.086 |
| SRR9715743 | Root | 4.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.423 |
| SRR8749028 | MeJA induced 9h | 2.084 |
| SRR8749029 | MeJA induced 9h | 1.645 |
| SRR8749030 | Uninduced | 1.745 |
| SRR8749031 | Uninduced | 0.111 |
| SRR8749032 | Uninduced | 0.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 21.413 |
| SRR8400027 | Control-Root | 15.697 |