Gene detail information of Glyur001579s00038556.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77720.10putative protein kinase 1
NRXP_003614790.10Serine/threonine protein kinase [Medicago truncatula]
COGYP_008152792.12.00E-21hypothetical protein SCE1572_32035 [Sorangium cellulosum So0157-2]
Swissprottr|Q39008|M3K1_ARATH1.00E-22Mitogen-activated protein kinase kinase kinase 1
trEMBLtr|G7K8X9|G7K8X9_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:AES97748.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold015791459123963+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08866TTK, MPS1 EC:2.7.12.1 Cell cycle map04110
Cell cycle - yeastmap04111


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001579s00038556.1PF00069.20Pkinase3646571.00E-53


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.375
SRR1783600control1.369
SRR1783602moderate drought stress1.407
SRR1811619moderate drought stress1.381

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.830
DRR006520Root Summer glycyrrhizin high producing strain1.918
DRR006521Root Winter glycyrrhizin high producing strain0.710
DRR006522Root Winter glycyrrhizin high producing strain0.685
DRR006523Root Summer glycyrrhizin low producing strain5.071
DRR006524Root Summer glycyrrhizin low producing strain5.074
DRR006525Leaf Summer glycyrrhizin high producing strain0.314
DRR006526Leaf Summer glycyrrhizin high producing strain0.249

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.604
SRR2868004Drought Stress(Tissue:root)3.267
SRR2967015Control (Tissue:root)4.197

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.924
SRR9715740Leave0.312
SRR9715741Leave0.484
SRR9715739Root0.417
SRR9715742Root0.749
SRR9715743Root0.887

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.323
SRR8749028MeJA induced 9h5.102
SRR8749029MeJA induced 9h3.417
SRR8749030Uninduced0.720
SRR8749031Uninduced0.373
SRR8749032Uninduced0.665

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.469
SRR8400027Control-Root3.875

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved