Gene detail information of Glyur001598s00038295.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31500.1 | 8.00E-95 | cytochrome P450, family 83, subfamily B, polypeptide 1 |
| NR | XP_007134003.1 | 2.50E-167 | hypothetical protein PHAVU_010G010900g [Phaseolus vulgaris] |
| COG | YP_004035232.1 | 5.00E-15 | cytochrome p450 [Halogeometricum borinquense DSM 11551] |
| Swissprot | tr|O65782|C83B1_ARATH | 6.00E-114 | Cytochrome P450 83B1 |
| trEMBL | tr|V7AK63|V7AK63_PHAVU | 9.00E-168 | Uncharacterized protein {ECO:0000313|EMBL:ESW05997.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01598 | 4901 | 6996 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71B35 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001598s00038295.1 | PF00067.17 | p450 | 35 | 366 | 7.60E-45 |
| Glyur001598s00038295.1 | PF00067.17 | p450 | 364 | 436 | 3.90E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.639 |
| SRR1783600 | control | 1.744 |
| SRR1783602 | moderate drought stress | 12.316 |
| SRR1811619 | moderate drought stress | 12.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.275 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.384 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.051 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.067 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.210 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.093 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.522 |
| SRR9715740 | Leave | 0.800 |
| SRR9715741 | Leave | 0.957 |
| SRR9715739 | Root | 0.204 |
| SRR9715742 | Root | 9.339 |
| SRR9715743 | Root | 6.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.089 |
| SRR8400027 | Control-Root | 1.499 |