Gene detail information of Glyur001600s00030347.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01600 | 8637 | 11421 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.546 |
| SRR1783600 | control | 7.609 |
| SRR1783602 | moderate drought stress | 10.650 |
| SRR1811619 | moderate drought stress | 10.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.270 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.392 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.347 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.068 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.604 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.314 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.502 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.241 |
| SRR2967015 | Control (Tissue:root) | 4.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.035 |
| SRR9715740 | Leave | 4.977 |
| SRR9715741 | Leave | 4.076 |
| SRR9715739 | Root | 1.267 |
| SRR9715742 | Root | 2.401 |
| SRR9715743 | Root | 1.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.519 |
| SRR8749028 | MeJA induced 9h | 2.960 |
| SRR8749029 | MeJA induced 9h | 2.272 |
| SRR8749030 | Uninduced | 0.478 |
| SRR8749031 | Uninduced | 0.005 |
| SRR8749032 | Uninduced | 0.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.261 |
| SRR8400027 | Control-Root | 9.253 |