Gene detail information of Glyur001600s00030351.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26220.11.00E-66S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NRAFK47350.18.34E-133unknown [Lotus japonicus]
COGNP_489219.11.00E-40O-methyltransferase [Nostoc sp. PCC 7120]
Swissprottr|Q9C5D7|CAMT3_ARATH2.00E-82Probable caffeoyl-CoA O-methyltransferase At4g26220
trEMBLtr|I3T4A8|I3T4A8_LOTJA3.00E-133Uncharacterized protein {ECO:0000313|EMBL:AFK47350.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016004325245360+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00588E2.1.1.104 EC:2.1.1.104 Phenylalanine metabolism map00360
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

molecular_function

GO:0008171  O-methyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001600s00030351.1PF01596.12Methyltransf_3552136.60E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.118
SRR1783600control15.149
SRR1783602moderate drought stress23.091
SRR1811619moderate drought stress22.314

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain69.137
DRR006520Root Summer glycyrrhizin high producing strain68.171
DRR006521Root Winter glycyrrhizin high producing strain55.471
DRR006522Root Winter glycyrrhizin high producing strain53.825
DRR006523Root Summer glycyrrhizin low producing strain65.969
DRR006524Root Summer glycyrrhizin low producing strain65.088
DRR006525Leaf Summer glycyrrhizin high producing strain35.865
DRR006526Leaf Summer glycyrrhizin high producing strain35.847

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)257.002
SRR2868004Drought Stress(Tissue:root)130.198
SRR2967015Control (Tissue:root)170.486

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave106.915
SRR9715740Leave58.548
SRR9715741Leave154.143
SRR9715739Root63.497
SRR9715742Root118.787
SRR9715743Root101.648

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h362.560
SRR8749028MeJA induced 9h189.355
SRR8749029MeJA induced 9h204.774
SRR8749030Uninduced276.303
SRR8749031Uninduced168.084
SRR8749032Uninduced159.712

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root105.350
SRR8400027Control-Root75.618

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved