Gene detail information of Glyur001601s00027171.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G53570.40FUS3-complementing gene 1
NRXP_003521349.10PREDICTED: serine/threonine-protein kinase AFC1-like isoform 1 [Glycine max]
COGYP_004959349.12.00E-18serine/threonine protein kinase [Streptomyces bingchenggensis BCW-1]
Swissprottr|P51566|AFC1_ARATH0Serine/threonine-protein kinase AFC1
trEMBLtr|I1JPE8|I1JPE8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G33100.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016011125016059-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001601s00027171.1PF00069.20Pkinase994271.10E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.734
SRR1783600control14.915
SRR1783602moderate drought stress19.261
SRR1811619moderate drought stress19.157

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.470
DRR006520Root Summer glycyrrhizin high producing strain18.185
DRR006521Root Winter glycyrrhizin high producing strain13.747
DRR006522Root Winter glycyrrhizin high producing strain12.813
DRR006523Root Summer glycyrrhizin low producing strain24.110
DRR006524Root Summer glycyrrhizin low producing strain24.457
DRR006525Leaf Summer glycyrrhizin high producing strain14.492
DRR006526Leaf Summer glycyrrhizin high producing strain14.327

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.831
SRR2868004Drought Stress(Tissue:root)41.033
SRR2967015Control (Tissue:root)39.902

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.165
SRR9715740Leave29.508
SRR9715741Leave24.426
SRR9715739Root8.484
SRR9715742Root13.221
SRR9715743Root11.439

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.297
SRR8749028MeJA induced 9h22.094
SRR8749029MeJA induced 9h13.742
SRR8749030Uninduced19.206
SRR8749031Uninduced14.262
SRR8749032Uninduced12.044

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.163
SRR8400027Control-Root30.203

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved