Gene detail information of Glyur001607s00029751.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G39210.10Glucose-1-phosphate adenylyltransferase family protein
NRXP_003541029.10PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1-like [Glycine max]
COGYP_005068635.14.00E-172glucose-1-phosphate adenylyltransferase [Arthrospira platensis NIES-39]
Swissprottr|Q00081|GLGL1_SOLTU0Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment)
trEMBLtr|I1LQ25|I1LQ25_SOYBN0Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016073814143690+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00975glgC EC:2.7.7.27 Starch and sucrose metabolism map00500
Amino sugar and nucleotide sugar metabolismmap00520
Biofilm formation - Escherichia colimap02026


Gene Ontology

biological_process

GO:0005978  glycogen biosynthetic process

GO:0009058  biosynthetic process


molecular_function

GO:0008878  glucose-1-phosphate adenylyltransferase activity

GO:0016779  nucleotidyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001607s00029751.1PF00483.18NTP_transferase983741.10E-78


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1873.563
SRR1783600control1878.009
SRR1783602moderate drought stress2400.075
SRR1811619moderate drought stress2386.151

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1147.387
DRR006520Root Summer glycyrrhizin high producing strain1133.427
DRR006521Root Winter glycyrrhizin high producing strain363.787
DRR006522Root Winter glycyrrhizin high producing strain353.721
DRR006523Root Summer glycyrrhizin low producing strain408.887
DRR006524Root Summer glycyrrhizin low producing strain406.864
DRR006525Leaf Summer glycyrrhizin high producing strain144.107
DRR006526Leaf Summer glycyrrhizin high producing strain143.512

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)98.565
SRR2868004Drought Stress(Tissue:root)32.478
SRR2967015Control (Tissue:root)19.305

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.822
SRR9715740Leave5.513
SRR9715741Leave20.970
SRR9715739Root123.830
SRR9715742Root704.377
SRR9715743Root585.190

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.019
SRR8749028MeJA induced 9h0.881
SRR8749029MeJA induced 9h3.131
SRR8749030Uninduced0.639
SRR8749031Uninduced0.682
SRR8749032Uninduced0.899

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root598.891
SRR8400027Control-Root767.906

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved