Gene detail information of Glyur001611s00032567.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10850.12.00E-119Metallo-hydrolase/oxidoreductase superfamily protein
NRAFK42856.11.30E-173unknown [Lotus japonicus]
COGYP_003269737.17.00E-69hydroxyacylglutathione hydrolase [Haliangium ochraceum DSM 14365]
Swissprottr|O24496|GLO2C_ARATH2.00E-150Hydroxyacylglutathione hydrolase cytoplasmic
trEMBLtr|I3SRG4|I3SRG4_LOTJA5.00E-174Uncharacterized protein {ECO:0000313|EMBL:AFK42856.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016111521321859-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01069E3.1.2.6, gloB EC:3.1.2.6 Pyruvate metabolism map00620


Gene Ontology

biological_process

GO:0006750  glutathione biosynthetic process


molecular_function

GO:0004416  hydroxyacylglutathione hydrolase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001611s00032567.1PF00753.22Lactamase_B101741.20E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control50.666
SRR1783600control50.578
SRR1783602moderate drought stress51.855
SRR1811619moderate drought stress51.700

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain67.094
DRR006520Root Summer glycyrrhizin high producing strain66.262
DRR006521Root Winter glycyrrhizin high producing strain67.180
DRR006522Root Winter glycyrrhizin high producing strain66.004
DRR006523Root Summer glycyrrhizin low producing strain72.088
DRR006524Root Summer glycyrrhizin low producing strain72.349
DRR006525Leaf Summer glycyrrhizin high producing strain52.805
DRR006526Leaf Summer glycyrrhizin high producing strain53.303

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)86.220
SRR2868004Drought Stress(Tissue:root)78.553
SRR2967015Control (Tissue:root)73.680

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave55.998
SRR9715740Leave63.849
SRR9715741Leave63.101
SRR9715739Root52.776
SRR9715742Root48.907
SRR9715743Root45.093

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h87.412
SRR8749028MeJA induced 9h69.504
SRR8749029MeJA induced 9h102.895
SRR8749030Uninduced72.687
SRR8749031Uninduced64.569
SRR8749032Uninduced79.235

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root72.743
SRR8400027Control-Root70.840

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved