Gene detail information of Glyur001611s00032569.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01611 | 51476 | 52261 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00021 | HMGCR | EC:1.1.1.34 | Terpenoid backbone biosynthesis | map00900 |
| AMPK signaling pathway | map04152 | |||
| Bile secretion | map04976 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.185 |
| SRR1783600 | control | 0.182 |
| SRR1783602 | moderate drought stress | 0.546 |
| SRR1811619 | moderate drought stress | 0.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.149 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.274 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.284 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.277 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.095 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.493 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.118 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.122 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.230 |
| SRR2967015 | Control (Tissue:root) | 0.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.398 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 3.167 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.989 |
| SRR9715743 | Root | 0.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.095 |
| SRR8400027 | Control-Root | 0.258 |