Gene detail information of Glyur001623s00036303.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30090.1 | 3.00E-111 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_007146796.1 | 0 | hypothetical protein PHAVU_006G070600g [Phaseolus vulgaris] |
| Swissprot | tr|O64815|HLS1L_ARATH | 1.00E-123 | Probable N-acetyltransferase HLS1-like |
| trEMBL | tr|V7BP10|V7BP10_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW18790.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01623 | 13611 | 16202 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001623s00036303.1 | PF00583.19 | Acetyltransf_1 | 60 | 149 | 8.10E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.760 |
| SRR1783600 | control | 8.777 |
| SRR1783602 | moderate drought stress | 5.432 |
| SRR1811619 | moderate drought stress | 5.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.845 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.115 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.231 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.134 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.622 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.912 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.577 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.503 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.309 |
| SRR2967015 | Control (Tissue:root) | 0.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.527 |
| SRR9715740 | Leave | 0.934 |
| SRR9715741 | Leave | 1.091 |
| SRR9715739 | Root | 1.119 |
| SRR9715742 | Root | 18.006 |
| SRR9715743 | Root | 12.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.025 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.302 |
| SRR8400027 | Control-Root | 1.055 |