Gene detail information of Glyur001627s00031857.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G21630.15.00E-101chitin elicitor receptor kinase 1
NRAAQ73158.16.14E-163LysM domain-containing receptor-like kinase 7 [Medicago truncatula]
COGNP_864467.12.00E-17serine/threonine-protein kinase pknA [Rhodopirellula baltica SH 1]
Swissprottr|A8R7E6|CERK1_ARATH2.00E-121Chitin elicitor receptor kinase 1 (Precursor)
trEMBLtr|Q6UD74|Q6UD74_MEDTR2.00E-163LysM domain-containing receptor-like kinase 7 {ECO:0000313|EMBL:AAQ73158.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0162712956715-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001627s00031857.1PF07714.12Pkinase_Tyr21112.70E-21
Glyur001627s00031857.1PF07714.12Pkinase_Tyr1122453.10E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.827
SRR1783600control1.866
SRR1783602moderate drought stress1.171
SRR1811619moderate drought stress1.073

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.094
DRR006520Root Summer glycyrrhizin high producing strain5.319
DRR006521Root Winter glycyrrhizin high producing strain7.045
DRR006522Root Winter glycyrrhizin high producing strain7.260
DRR006523Root Summer glycyrrhizin low producing strain7.298
DRR006524Root Summer glycyrrhizin low producing strain7.431
DRR006525Leaf Summer glycyrrhizin high producing strain0.951
DRR006526Leaf Summer glycyrrhizin high producing strain0.986

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.350
SRR2868004Drought Stress(Tissue:root)13.717
SRR2967015Control (Tissue:root)9.209

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.677
SRR9715740Leave3.298
SRR9715741Leave5.685
SRR9715739Root0.709
SRR9715742Root4.399
SRR9715743Root3.890

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.952
SRR8749028MeJA induced 9h21.615
SRR8749029MeJA induced 9h8.937
SRR8749030Uninduced15.807
SRR8749031Uninduced19.707
SRR8749032Uninduced11.235

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.875
SRR8400027Control-Root10.704

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved