Gene detail information of Glyur001639s00029615.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32180.39.00E-129pantothenate kinase 2
NRXP_004509755.10PREDICTED: pantothenate kinase 2-like [Cicer arietinum]
COGNP_845240.17.00E-10pantothenate kinase [Bacillus anthracis str. Ames]
Swissprottr|Q0J035|PANK2_ORYSJ1.00E-174Pantothenate kinase 2
trEMBLtr|I1KXE5|I1KXE5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G39370.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016391165817673-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09680coaW EC:2.7.1.33 Pantothenate and CoA biosynthesis map00770


Gene Ontology

biological_process

GO:0015937  coenzyme A biosynthetic process


molecular_function

GO:0004594  pantothenate kinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001639s00029615.1PF03630.9Fumble223597.40E-134


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.509
SRR1783600control18.676
SRR1783602moderate drought stress12.870
SRR1811619moderate drought stress12.800

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.208
DRR006520Root Summer glycyrrhizin high producing strain28.083
DRR006521Root Winter glycyrrhizin high producing strain13.661
DRR006522Root Winter glycyrrhizin high producing strain13.557
DRR006523Root Summer glycyrrhizin low producing strain27.925
DRR006524Root Summer glycyrrhizin low producing strain28.234
DRR006525Leaf Summer glycyrrhizin high producing strain13.128
DRR006526Leaf Summer glycyrrhizin high producing strain13.030

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)54.116
SRR2868004Drought Stress(Tissue:root)57.967
SRR2967015Control (Tissue:root)56.920

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.621
SRR9715740Leave36.506
SRR9715741Leave39.276
SRR9715739Root4.844
SRR9715742Root17.130
SRR9715743Root16.086

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.607
SRR8749028MeJA induced 9h22.098
SRR8749029MeJA induced 9h14.033
SRR8749030Uninduced31.842
SRR8749031Uninduced20.227
SRR8749032Uninduced16.546

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.598
SRR8400027Control-Root44.187

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved