Gene detail information of Glyur001642s00033440.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G17810.10pyrimidine 1
NRXP_003528976.10PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Glycine max]
COGYP_005446576.19.00E-129dihydropyrimidine dehydrogenase [Phycisphaera mikurensis NBRC 102666]
trEMBLtr|I1KJ84|I1KJ84_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G11890.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016429336847+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00207DPYD EC:1.3.1.2 Pyrimidine metabolism map00240
beta-Alanine metabolismmap00410
Pantothenate and CoA biosynthesismap00770
Drug metabolism - other enzymesmap00983


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003824  catalytic activity

GO:0016627  oxidoreductase activity, acting on the CH-CH group of donors

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001642s00033440.2PF01180.16DHO_dh493368.70E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.469
SRR1783600control26.628
SRR1783602moderate drought stress21.364
SRR1811619moderate drought stress21.288

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.007
DRR006520Root Summer glycyrrhizin high producing strain30.648
DRR006521Root Winter glycyrrhizin high producing strain28.785
DRR006522Root Winter glycyrrhizin high producing strain28.135
DRR006523Root Summer glycyrrhizin low producing strain37.289
DRR006524Root Summer glycyrrhizin low producing strain37.273
DRR006525Leaf Summer glycyrrhizin high producing strain31.114
DRR006526Leaf Summer glycyrrhizin high producing strain31.144

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)113.004
SRR2868004Drought Stress(Tissue:root)103.088
SRR2967015Control (Tissue:root)97.934

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave47.394
SRR9715740Leave60.743
SRR9715741Leave57.701
SRR9715739Root12.587
SRR9715742Root24.131
SRR9715743Root20.345

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h57.501
SRR8749028MeJA induced 9h93.123
SRR8749029MeJA induced 9h84.557
SRR8749030Uninduced125.488
SRR8749031Uninduced113.075
SRR8749032Uninduced137.508

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root73.415
SRR8400027Control-Root69.109

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved