Gene detail information of Glyur001643s00028415.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G18750.30with no lysine (K) kinase 6
NRKEH20891.10WNK kinase [Medicago truncatula]
COGYP_360177.12.00E-20serine/threonine protein kinase [Carboxydothermus hydrogenoformans Z-2901]
Swissprottr|Q8S8Y8|WNK6_ARATH0Probable serine/threonine-protein kinase WNK6
trEMBLtr|A0A072TUS1|A0A072TUS1_MEDTR0WNK kinase {ECO:0000313|EMBL:KEH20891.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01643879212040-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.5.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001643s00028415.1PF00069.20Pkinase342908.40E-53


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.647
SRR1783600control6.615
SRR1783602moderate drought stress5.318
SRR1811619moderate drought stress5.245

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.092
DRR006520Root Summer glycyrrhizin high producing strain7.815
DRR006521Root Winter glycyrrhizin high producing strain20.017
DRR006522Root Winter glycyrrhizin high producing strain19.448
DRR006523Root Summer glycyrrhizin low producing strain7.651
DRR006524Root Summer glycyrrhizin low producing strain7.774
DRR006525Leaf Summer glycyrrhizin high producing strain15.547
DRR006526Leaf Summer glycyrrhizin high producing strain15.439

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.254
SRR2868004Drought Stress(Tissue:root)17.369
SRR2967015Control (Tissue:root)14.074

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.965
SRR9715740Leave8.910
SRR9715741Leave10.032
SRR9715739Root0.531
SRR9715742Root2.662
SRR9715743Root2.031

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.481
SRR8749028MeJA induced 9h11.529
SRR8749029MeJA induced 9h10.472
SRR8749030Uninduced15.360
SRR8749031Uninduced37.594
SRR8749032Uninduced20.581

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.492
SRR8400027Control-Root9.075

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved