Gene detail information of Glyur001646s00038302.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G51630.24.00E-141with no lysine (K) kinase 5
NRKHN14259.10Putative serine/threonine-protein kinase WNK5 [Glycine soja]
COGYP_315458.12.00E-19Serine/threonine protein kinase [Thiobacillus denitrificans ATCC 25259]
Swissprottr|Q9SCU5|WNK5_ARATH3.00E-180Probable serine/threonine-protein kinase WNK5
trEMBLtr|K7K3L1|K7K3L1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G32450.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0164635879691+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.5.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001646s00038302.1PF00069.20Pkinase282889.50E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.416
SRR1783600control4.504
SRR1783602moderate drought stress4.147
SRR1811619moderate drought stress4.131

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.897
DRR006520Root Summer glycyrrhizin high producing strain0.835
DRR006521Root Winter glycyrrhizin high producing strain0.515
DRR006522Root Winter glycyrrhizin high producing strain0.492
DRR006523Root Summer glycyrrhizin low producing strain4.205
DRR006524Root Summer glycyrrhizin low producing strain4.214
DRR006525Leaf Summer glycyrrhizin high producing strain54.848
DRR006526Leaf Summer glycyrrhizin high producing strain54.561

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)51.764
SRR2868004Drought Stress(Tissue:root)79.444
SRR2967015Control (Tissue:root)60.908

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.735
SRR9715740Leave76.805
SRR9715741Leave18.098
SRR9715739Root3.221
SRR9715742Root3.656
SRR9715743Root2.863

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.765
SRR8749028MeJA induced 9h11.528
SRR8749029MeJA induced 9h2.051
SRR8749030Uninduced19.241
SRR8749031Uninduced17.493
SRR8749032Uninduced5.325

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.410
SRR8400027Control-Root19.325

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved