Gene detail information of Glyur001647s00032312.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01220.10L-fucokinase/GDP-L-fucose pyrophosphorylase
NRXP_004494840.10PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like [Cicer arietinum]
COGYP_004265896.12.00E-95Fucokinase [Syntrophobotulus glycolicus DSM 8271]
Swissprottr|Q9LNJ9|FKGP_ARATH0Fucose-1-phosphate guanylyltransferase
trEMBLtr|G7L443|G7L443_MEDTR0L-fucokinase/GDP-L-fucose pyrophosphorylase {ECO:0000313|EMBL:AES82793.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016474373749461+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05305FUK EC:2.7.1.52 Fructose and mannose metabolism map00051
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0005524  ATP binding

GO:0016301  kinase activity

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001647s00032312.1PF07959.7Fucokinase1425391.00E-144
Glyur001647s00032312.1PF00288.21GHMP_kinases_N8348933.20E-05
Glyur001647s00032312.1PF08544.8GHMP_kinases_C97910551.10E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.162
SRR1783600control10.166
SRR1783602moderate drought stress8.583
SRR1811619moderate drought stress8.739

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.542
DRR006520Root Summer glycyrrhizin high producing strain12.466
DRR006521Root Winter glycyrrhizin high producing strain5.575
DRR006522Root Winter glycyrrhizin high producing strain5.221
DRR006523Root Summer glycyrrhizin low producing strain10.898
DRR006524Root Summer glycyrrhizin low producing strain11.257
DRR006525Leaf Summer glycyrrhizin high producing strain10.579
DRR006526Leaf Summer glycyrrhizin high producing strain10.536

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.580
SRR2868004Drought Stress(Tissue:root)21.644
SRR2967015Control (Tissue:root)21.828

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.241
SRR9715740Leave11.171
SRR9715741Leave10.498
SRR9715739Root10.154
SRR9715742Root15.444
SRR9715743Root14.552

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.912
SRR8749028MeJA induced 9h4.881
SRR8749029MeJA induced 9h3.087
SRR8749030Uninduced2.065
SRR8749031Uninduced0.494
SRR8749032Uninduced0.790

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.601
SRR8400027Control-Root18.497

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved