Gene detail information of Glyur001649s00037651.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03210.1 | 1.00E-107 | fucosyltransferase 2 |
| NR | AES86458.2 | 0 | galactoside 2-alpha-L-fucosyltransferase-like protein [Medicago truncatula] |
| Swissprot | tr|O81053|FUT2_ARATH | 1.00E-139 | Fucosyltransferase 2 |
| trEMBL | tr|G7JEG8|G7JEG8_MEDTR | 0 | Galactoside 2-alpha-L-fucosyltransferase-like protein {ECO:0000313|EMBL:AES86458.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01649 | 47685 | 55869 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT37 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001649s00037651.1 | PF03254.8 | XG_FTase | 101 | 567 | 1.80E-182 |
| Glyur001649s00037651.1 | PF03254.8 | XG_FTase | 645 | 1071 | 5.90E-163 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.315 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.370 |
| SRR2967015 | Control (Tissue:root) | 1.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.481 |
| SRR8749028 | MeJA induced 9h | 8.650 |
| SRR8749029 | MeJA induced 9h | 3.745 |
| SRR8749030 | Uninduced | 1.274 |
| SRR8749031 | Uninduced | 0.337 |
| SRR8749032 | Uninduced | 0.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.111 |
| SRR8400027 | Control-Root | 0.044 |