Gene detail information of Glyur001650s00035482.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22170.2 | 7.00E-40 | far-red elongated hypocotyls 3 |
| NR | KHN40913.1 | 1.06E-102 | Protein FAR-RED ELONGATED HYPOCOTYL 3 [Glycine soja] |
| Swissprot | tr|Q9LIE5|FHY3_ARATH | 1.00E-45 | Protein FAR-RED ELONGATED HYPOCOTYL 3 |
| trEMBL | tr|K7LB16|K7LB16_SOYBN | 2.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G00346.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01650 | 20628 | 25168 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001650s00035482.1 | PF03101.10 | FAR1 | 44 | 134 | 3.70E-23 |
| Glyur001650s00035482.1 | PF04434.12 | SWIM | 182 | 205 | 1.30E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.471 |
| SRR1783600 | control | 7.650 |
| SRR1783602 | moderate drought stress | 9.756 |
| SRR1811619 | moderate drought stress | 9.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.587 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.493 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.456 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.547 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.958 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.235 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.127 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.226 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.162 |
| SRR2967015 | Control (Tissue:root) | 7.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.370 |
| SRR9715740 | Leave | 3.914 |
| SRR9715741 | Leave | 3.116 |
| SRR9715739 | Root | 0.756 |
| SRR9715742 | Root | 3.457 |
| SRR9715743 | Root | 3.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.574 |
| SRR8749028 | MeJA induced 9h | 2.530 |
| SRR8749029 | MeJA induced 9h | 2.044 |
| SRR8749030 | Uninduced | 2.529 |
| SRR8749031 | Uninduced | 2.972 |
| SRR8749032 | Uninduced | 1.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.278 |
| SRR8400027 | Control-Root | 8.669 |