Gene detail information of Glyur001651s00034245.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13160.13.00E-136Protein kinase superfamily protein
NRXP_004493001.10PREDICTED: serine/threonine-protein kinase PBS1-like isoform X2 [Cicer arietinum]
COGNP_864467.11.00E-23serine/threonine-protein kinase pknA [Rhodopirellula baltica SH 1]
Swissprottr|Q9FE20|PBS1_ARATH9.00E-168Serine/threonine-protein kinase PBS1
trEMBLtr|G7KW74|G7KW74_MEDTR0Receptor Serine/Threonine kinase {ECO:0000313|EMBL:AES80674.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016511967725297+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13430PBS1 EC:2.7.11.1 Plant-pathogen interaction map04626


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001651s00034245.1PF00069.20Pkinase783459.70E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.802
SRR1783600control3.790
SRR1783602moderate drought stress2.149
SRR1811619moderate drought stress2.092

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.376
DRR006520Root Summer glycyrrhizin high producing strain3.381
DRR006521Root Winter glycyrrhizin high producing strain13.000
DRR006522Root Winter glycyrrhizin high producing strain12.246
DRR006523Root Summer glycyrrhizin low producing strain6.563
DRR006524Root Summer glycyrrhizin low producing strain6.848
DRR006525Leaf Summer glycyrrhizin high producing strain0.944
DRR006526Leaf Summer glycyrrhizin high producing strain0.902

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.448
SRR2868004Drought Stress(Tissue:root)2.313
SRR2967015Control (Tissue:root)2.790

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.984
SRR9715740Leave1.856
SRR9715741Leave2.054
SRR9715739Root0.176
SRR9715742Root1.323
SRR9715743Root1.026

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.980
SRR8749028MeJA induced 9h10.644
SRR8749029MeJA induced 9h9.510
SRR8749030Uninduced8.303
SRR8749031Uninduced11.003
SRR8749032Uninduced14.871

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.240
SRR8400027Control-Root3.517

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved