Gene detail information of Glyur001652s00038196.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12900.12.00E-167glyceraldehyde 3-phosphate dehydrogenase A subunit 2
NRAEH04452.10glyceraldehyde-3-phosphate dehydrogenase [Arachis hypogaea]
COGYP_007053884.11.00E-163glyceraldehyde 3-phosphate dehydrogenase (NADP+) [Rivularia sp. PCC 7116]
Swissprottr|P12858|G3PA_PEA0Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Precursor)
trEMBLtr|F8UX79|F8UX79_ARAHY0Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016522539929778-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05298GAPA EC:1.2.1.13 Carbon metabolism map01200
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006006  glucose metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

GO:0050661  NADP binding

GO:0051287  NAD binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001652s00038196.1PF00044.19Gp_dh_N672173.60E-53
Glyur001652s00038196.1PF02800.15Gp_dh_C2223785.90E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.202
SRR1783600control0.193
SRR1783602moderate drought stress0.175
SRR1811619moderate drought stress0.174

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.071
DRR006520Root Summer glycyrrhizin high producing strain0.070
DRR006521Root Winter glycyrrhizin high producing strain0.293
DRR006522Root Winter glycyrrhizin high producing strain0.285
DRR006523Root Summer glycyrrhizin low producing strain0.652
DRR006524Root Summer glycyrrhizin low producing strain0.579
DRR006525Leaf Summer glycyrrhizin high producing strain246.436
DRR006526Leaf Summer glycyrrhizin high producing strain246.090

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.735
SRR2868004Drought Stress(Tissue:root)6.387
SRR2967015Control (Tissue:root)1.592

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave315.438
SRR9715740Leave367.520
SRR9715741Leave280.431
SRR9715739Root0.098
SRR9715742Root0.794
SRR9715743Root0.563

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.220
SRR8749028MeJA induced 9h0.274
SRR8749029MeJA induced 9h0.040
SRR8749030Uninduced0.166
SRR8749031Uninduced0.000
SRR8749032Uninduced0.037

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.520
SRR8400027Control-Root0.774

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved