Gene detail information of Glyur001653s00028827.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22590.1 | 4.00E-127 | UDP-Glycosyltransferase superfamily protein |
| NR | AFK35814.1 | 0 | unknown [Medicago truncatula] |
| Swissprot | tr|Q940V3|U91A1_ARATH | 3.00E-166 | UDP-glycosyltransferase 91A1 |
| trEMBL | tr|I3S6C2|I3S6C2_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK35814.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01653 | 61145 | 62545 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001653s00028827.1 | PF00201.13 | UDPGT | 267 | 436 | 2.30E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.664 |
| SRR1783600 | control | 1.651 |
| SRR1783602 | moderate drought stress | 1.675 |
| SRR1811619 | moderate drought stress | 1.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.185 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.148 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.398 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.388 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.858 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.787 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.930 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.807 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.981 |
| SRR2967015 | Control (Tissue:root) | 3.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.469 |
| SRR9715740 | Leave | 0.818 |
| SRR9715741 | Leave | 1.571 |
| SRR9715739 | Root | 3.823 |
| SRR9715742 | Root | 2.498 |
| SRR9715743 | Root | 2.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.480 |
| SRR8749028 | MeJA induced 9h | 0.772 |
| SRR8749029 | MeJA induced 9h | 0.682 |
| SRR8749030 | Uninduced | 0.045 |
| SRR8749031 | Uninduced | 0.072 |
| SRR8749032 | Uninduced | 0.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.480 |
| SRR8400027 | Control-Root | 4.619 |