Gene detail information of Glyur001656s00040592.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10760.1 | 2.00E-05 | mRNAadenosine methylase |
| NR | XP_003516278.1 | 1.39E-11 | PREDICTED: phosphoenolpyruvate carboxykinase [ATP]-like [Glycine max] |
| Swissprot | tr|Q6EU10|MTA70_ORYSJ | 4.00E-08 | Probable N6-adenosine-methyltransferase MT-A70-like |
| trEMBL | tr|I1J6V7|I1J6V7_SOYBN | 5.00E-12 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G23790.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01656 | 18909 | 23599 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01610 | E4.1.1.49, pckA | EC:4.1.1.49 | Carbon metabolism | map01200 |
| Glycolysis / Gluconeogenesis | map00010 | |||
| Citrate cycle (TCA cycle) | map00020 | |||
| Pyruvate metabolism | map00620 | |||
| Carbon fixation in photosynthetic organisms | map00710 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.352 |
| SRR1783600 | control | 39.001 |
| SRR1783602 | moderate drought stress | 53.462 |
| SRR1811619 | moderate drought stress | 55.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.408 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.417 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.034 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.015 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.786 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.699 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.656 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.592 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.352 |
| SRR2967015 | Control (Tissue:root) | 1.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.107 |
| SRR9715740 | Leave | 11.804 |
| SRR9715741 | Leave | 11.601 |
| SRR9715739 | Root | 0.916 |
| SRR9715742 | Root | 1.932 |
| SRR9715743 | Root | 2.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.528 |
| SRR8749028 | MeJA induced 9h | 3.915 |
| SRR8749029 | MeJA induced 9h | 5.298 |
| SRR8749030 | Uninduced | 8.694 |
| SRR8749031 | Uninduced | 4.278 |
| SRR8749032 | Uninduced | 3.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 21.231 |
| SRR8400027 | Control-Root | 21.561 |