Gene detail information of Glyur001658s00045059.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G04450.14.00E-33WRKY family transcription factor
NRXP_004488182.16.01E-154PREDICTED: probable WRKY transcription factor 42-like isoform X1 [Cicer arietinum]
Swissprottr|Q9XEC3|WRK42_ARATH2.00E-47Probable WRKY transcription factor 42
trEMBLtr|G7IQG1|G7IQG1_MEDTR2.00E-144WRKY family transcription factor {ECO:0000313|EMBL:AES65682.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016585486759252+


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001658s00045059.1PF03106.10WRKY2222671.00E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.042
SRR1783600control18.294
SRR1783602moderate drought stress20.581
SRR1811619moderate drought stress20.085

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.190
DRR006520Root Summer glycyrrhizin high producing strain0.160
DRR006521Root Winter glycyrrhizin high producing strain0.297
DRR006522Root Winter glycyrrhizin high producing strain0.358
DRR006523Root Summer glycyrrhizin low producing strain0.081
DRR006524Root Summer glycyrrhizin low producing strain0.082
DRR006525Leaf Summer glycyrrhizin high producing strain0.819
DRR006526Leaf Summer glycyrrhizin high producing strain1.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.074
SRR2868004Drought Stress(Tissue:root)51.845
SRR2967015Control (Tissue:root)28.720

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.072
SRR9715740Leave2.477
SRR9715741Leave6.746
SRR9715739Root3.422
SRR9715742Root6.824
SRR9715743Root6.535

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h131.643
SRR8749028MeJA induced 9h312.611
SRR8749029MeJA induced 9h283.967
SRR8749030Uninduced162.200
SRR8749031Uninduced227.847
SRR8749032Uninduced97.909

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.872
SRR8400027Control-Root13.226

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved