Gene detail information of Glyur001663s00027483.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72710.10casein kinase 1-like protein 2
NRXP_004510406.10PREDICTED: casein kinase I isoform delta-like [Cicer arietinum]
COGYP_632759.19.00E-18serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|G7LI85|G7LI85_MEDTR0Casein kinase I-like protein {ECO:0000313|EMBL:AET01635.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016633173736762+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02218CSNK1, CKI EC:2.7.11.1 MAPK signaling pathway - yeast map04011
Hippo signaling pathway - multiple speciesmap04392


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001663s00027483.2PF00069.20Pkinase92531.10E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control40.291
SRR1783600control39.996
SRR1783602moderate drought stress41.540
SRR1811619moderate drought stress41.363

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.402
DRR006520Root Summer glycyrrhizin high producing strain28.503
DRR006521Root Winter glycyrrhizin high producing strain48.460
DRR006522Root Winter glycyrrhizin high producing strain47.314
DRR006523Root Summer glycyrrhizin low producing strain34.339
DRR006524Root Summer glycyrrhizin low producing strain34.363
DRR006525Leaf Summer glycyrrhizin high producing strain38.740
DRR006526Leaf Summer glycyrrhizin high producing strain38.488

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)60.861
SRR2868004Drought Stress(Tissue:root)82.462
SRR2967015Control (Tissue:root)80.873

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave48.803
SRR9715740Leave54.281
SRR9715741Leave58.973
SRR9715739Root21.482
SRR9715742Root30.869
SRR9715743Root30.290

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.516
SRR8749028MeJA induced 9h36.625
SRR8749029MeJA induced 9h21.745
SRR8749030Uninduced39.119
SRR8749031Uninduced22.863
SRR8749032Uninduced19.428

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root53.945
SRR8400027Control-Root53.177

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved