Gene detail information of Glyur001670s00039738.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G53950.1 | 0 | glyoxal oxidase-related protein |
| NR | KDP24540.1 | 0 | hypothetical protein JCGZ_25104 [Jatropha curcas] |
| COG | YP_003953625.1 | 1.00E-26 | hypothetical protein STAUR_4011 [Stigmatella aurantiaca DW4/3-1] |
| trEMBL | tr|A0A067JX09|A0A067JX09_JATCU | 0 | Uncharacterized protein {ECO:0000313|EMBL:KDP24540.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01670 | 16780 | 18387 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | AA5 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001670s00039738.1 | PF07250.6 | Glyoxal_oxid_N | 42 | 280 | 4.10E-98 |
| Glyur001670s00039738.1 | PF09118.6 | DUF1929 | 432 | 534 | 8.60E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.086 |
| SRR1783600 | control | 52.597 |
| SRR1783602 | moderate drought stress | 38.529 |
| SRR1811619 | moderate drought stress | 38.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.302 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.070 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.345 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.339 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.995 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.017 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.953 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 24.134 |
| SRR2868004 | Drought Stress(Tissue:root) | 61.722 |
| SRR2967015 | Control (Tissue:root) | 36.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 9.985 |
| SRR9715740 | Leave | 6.867 |
| SRR9715741 | Leave | 9.125 |
| SRR9715739 | Root | 313.357 |
| SRR9715742 | Root | 90.293 |
| SRR9715743 | Root | 133.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.099 |
| SRR8749028 | MeJA induced 9h | 10.227 |
| SRR8749029 | MeJA induced 9h | 4.453 |
| SRR8749030 | Uninduced | 2.299 |
| SRR8749031 | Uninduced | 0.494 |
| SRR8749032 | Uninduced | 1.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 117.042 |
| SRR8400027 | Control-Root | 86.527 |