Gene detail information of Glyur001671s00039462.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G23870.10trehalose-phosphatase/synthase 9
NRXP_003519705.10PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Glycine max]
COGYP_004625437.11.00E-124alpha,alpha-trehalose-phosphate synthase [Thermodesulfatator indicus DSM 15286]
Swissprottr|O80738|TPS10_ARATH0Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10
trEMBLtr|I1JC14|I1JC14_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G03820.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016711403417396-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001671s00039462.1PF00982.16Glyco_transf_20595451.30E-185
Glyur001671s00039462.1PF02358.11Trehalose_PPase5947542.10E-57


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.076
SRR1783600control2.122
SRR1783602moderate drought stress2.101
SRR1811619moderate drought stress1.963

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.070
DRR006520Root Summer glycyrrhizin high producing strain8.914
DRR006521Root Winter glycyrrhizin high producing strain6.823
DRR006522Root Winter glycyrrhizin high producing strain6.520
DRR006523Root Summer glycyrrhizin low producing strain11.784
DRR006524Root Summer glycyrrhizin low producing strain11.495
DRR006525Leaf Summer glycyrrhizin high producing strain3.702
DRR006526Leaf Summer glycyrrhizin high producing strain3.643

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.144
SRR2868004Drought Stress(Tissue:root)24.913
SRR2967015Control (Tissue:root)23.359

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.654
SRR9715740Leave16.068
SRR9715741Leave19.529
SRR9715739Root6.266
SRR9715742Root27.938
SRR9715743Root24.220

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.672
SRR8749028MeJA induced 9h23.713
SRR8749029MeJA induced 9h18.308
SRR8749030Uninduced17.731
SRR8749031Uninduced17.127
SRR8749032Uninduced16.154

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.385
SRR8400027Control-Root10.303

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved