Gene detail information of Glyur001674s00035725.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01380.16.00E-92transferases;sulfuric ester hydrolases;catalytics;transferases
NRKEH22286.15.80E-117phosphatidylinositolglycan class N protein [Medicago truncatula]
trEMBLtr|G7L3B0|G7L3B0_MEDTR2.00E-117Phosphatidylinositolglycan class N protein {ECO:0000313|EMBL:AES78410.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016744031141556+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05285PIGN EC:2.7.-.- Glycosylphosphatidylinositol(GPI)-anchor biosynthesis map00563


Gene Ontology

biological_process

GO:0006506  GPI anchor biosynthetic process

GO:0008152  metabolic process


cellular_component

GO:0005789  endoplasmic reticulum membrane


molecular_function

GO:0003824  catalytic activity

GO:0016740  transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.292
SRR1783600control4.516
SRR1783602moderate drought stress7.801
SRR1811619moderate drought stress8.381

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.226
DRR006520Root Summer glycyrrhizin high producing strain3.585
DRR006521Root Winter glycyrrhizin high producing strain2.510
DRR006522Root Winter glycyrrhizin high producing strain2.621
DRR006523Root Summer glycyrrhizin low producing strain1.899
DRR006524Root Summer glycyrrhizin low producing strain2.451
DRR006525Leaf Summer glycyrrhizin high producing strain1.645
DRR006526Leaf Summer glycyrrhizin high producing strain1.426

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.871
SRR2868004Drought Stress(Tissue:root)16.876
SRR2967015Control (Tissue:root)18.699

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.374
SRR9715740Leave2.889
SRR9715741Leave5.407
SRR9715739Root0.935
SRR9715742Root10.375
SRR9715743Root7.215

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.063
SRR8749028MeJA induced 9h3.253
SRR8749029MeJA induced 9h0.427
SRR8749030Uninduced0.238
SRR8749031Uninduced0.091
SRR8749032Uninduced0.353

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.682
SRR8400027Control-Root18.194

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved